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A Multi-omic Atlas of Human Embryonic Skeletal Development -Multiome GEX+ATAC
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ArrayExpress:E-MTAB-14385
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A spatial human thymus cell atlas mapped to a continuous tissue axis
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ENA:PRJEB77091
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A spatial human thymus cell atlas mapped to a continuous tissue axis
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BioStudies:S-BIAD1257
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A spatial human thymus cell atlas mapped to a continuous tissue axis
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EGA:EGAD00001015384
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A spatially resolved single cell atlas of human gastrulation
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ArrayExpress:E-MTAB-9388
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Aberrant gene expression leakage from lineage-specific heterochromatic loci during senescence
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GEO:GSE180469
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Aberrant gene expression leakage from lineage-specific heterochromatic loci during senescence
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GEO:GSE130457
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Amniogenesis occurs in two independent waves in primate embryos
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GEO:GSE179309
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Blood and immune cell development in human fetal bone marrow and in Down syndrome
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GEO:GSE166895
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Combinatorial profiling of multiple histone modifications and transcriptome in single cells using scMTR-seq
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GEO:GSE277856
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Developmental Cell Atlas: Yolk sac cell atlas reveals multiorgan functions during human early development
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URL:https://developmental.cellatlas.io/yolk-sac
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Ectopic expression of DNMT3L in human trophoblast stem cells restores features of the placental methylome
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DOI:10.17632/cc6ftgctbd.1
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Ectopic expression of DNMT3L in human trophoblast stem cells restores features of the placental methylome.
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GEO:GSE266196
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HCA_Bone_Foetal_WSSS_RNA_SB
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ENA:PRJEB41514
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Hierarchical lineage architecture of human and avian spinal cord revealed by single-cell genomic barcoding
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GEO:GSE312424
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Hypoxia promotes airway differentiation in the human lung epithelium
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GEO:GSE273089
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Hypoxia promotes airway differentiation in the human lung epithelium [Bulk RNA-seq]
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GEO:GSE272860
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Hypoxia promotes airway differentiation in the human lung epithelium [DamID-seq]
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GEO:GSE272859
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Hypoxia promotes airway differentiation in the human lung epithelium [scRNAseq_hypoxia_AT2]
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GEO:GSE296547
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In vitro modelling of the human embryo implantation niche
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ArrayExpress:E-MTAB-13629
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Integrated Multi-Omics Reveal Polycomb Repressive Complex 2 Restricts Human Trophoblast Induction
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PRIDE:PXD028162
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Integrated Multi-Omics Reveal Polycomb Repressive Complex 2 Restricts Human Trophoblast Induction
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PRIDE:PXD032792
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Integrated Multi-Omics Reveal Polycomb Repressive Complex 2 Restricts Human Trophoblast Induction.
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GEO:GSE176175
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Interactive 3D reconstruction of the head arteries
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URL:https://hudeca.com/3D-models/Inserm-foets-responsive.html
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Interactive 3D reconstruction of the skeleton
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URL:https://hudeca.com/3D-models/Inserm-foetus2/Inserm-foetus2-responsive.html
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Live imaging of late-stage preimplantation human embryos reveals late-stage de novo mitotic errors
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DOI:10.5281/zenodo.16994340
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Live imaging of late-stage preimplantation human embryos reveals late-stage de novo mitotic errors
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BioStudies:S-BIAD2325
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Live imaging of late-stage preimplantation human embryos reveals late-stage de novo mitotic errors
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DOI:10.5281/zenodo.16996800
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Mapping immune development across tissues in the human fetus - 10X spatial transcriptomics
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ArrayExpress:E-MTAB-11341
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Mapping the developing human immune system across organs - VDJ-seq
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ArrayExpress:E-MTAB-11388
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Mapping the developing human immune system across organs - scRNA-seq
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ArrayExpress:E-MTAB-11343
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Multimodal profiling of human postnatal thymocytes using CITE-seq
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GEO:GSE271304
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NANOGP1, a tandem duplicate of NANOG, exhibits partial functional conservation in human naïve pluripotent stem cells
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GEO:GSE204934
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NODAL signalling does not initiate or maintain the pluripotent epiblast in pre-implantation human development
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BioStudies:S-BIAD1398
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PBAT sequencing of human embryonic stem cells
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EGA:EGAD50000001475
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PBAT sequencing of primary first trimester cytotrophoblast and mural trophectoderm.
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EGA:EGAS50000000661
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Polycomb Repressive Complex 2 Restricts Human Naive Pluripotent Stem Cell to Trophoblast Fate Induction
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PRIDE:PXD028111
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Processed data for CREST analysis
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DOI:10.5281/zenodo.17930156
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RNA-seq of bulk induced trophoblast stem cells reprogrammed from human embryonic stem cells
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ArrayExpress:E-MTAB-10748
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RNA-seq of bulk trophectoderm microdissected from human blastocysts cultured to day 5, day 6 and day 7 post-fertilisation
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ArrayExpress:E-MTAB-10749
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RNAScope Data - Mapping the developing human immune system across organs
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BioStudies:S-BIAD515
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Self-organisation of human pluripotent stem cells into three-dimensional model of post-implantation development
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ArrayExpress:E-MTAB-12045
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Single cell analysis of emergent haematopoiesis in the human fetal bone marrow (10X)
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ArrayExpress:E-MTAB-9389
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Single cell analysis of emergent haematopoiesis in the human fetal bone marrow (10X) CITE-seq
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ArrayExpress:E-MTAB-10042
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Single cell analysis of emergent haematopoiesis in the human fetal bone marrow (SS2)
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ArrayExpress:E-MTAB-9801
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Single cell transcriptome atlases of the developing mouse and human spinal cord
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GEO:GSE171892
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Single-cell RNA-seq of a three-dimensional multilineage human organogenesis model showing endothelial-to-hematopoietic-transition in vitro
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ArrayExpress:E-MTAB-13632
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Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst
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GEO:GSE297052
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Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst
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DOI:10.6084/m9.figshare.28597145
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Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst
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DOI:10.5281/zenodo.15128175
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Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst
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GEO:GSE250614
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Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst [RNA-seq II]
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GEO:GSE250613
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Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst [RNA-seq I]
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GEO:GSE239843
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Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst [mouse_ERKi_scRNAseq]
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GEO:GSE297478
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Yolk sac cell atlas reveals multiorgan functions during human early development
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BioStudies:S-DHCA0
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mTOR activity paces human blastocyst stage developmental progression
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GEO:GSE267302
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mTOR activity paces human blastocyst stage developmental progression
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PRIDE:PXD052209
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mTOR activity paces human blastocyst stage developmental progression (data set 1)
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PRIDE:PXD029513
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mTOR activity paces human blastocyst stage developmental progression (data set 2)
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PRIDE:PXD036258
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